Semi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2:ERG Fusion Status in Prostate Cancer Using Whole Slide Images.

TitleSemi-Supervised, Attention-Based Deep Learning for Predicting TMPRSS2:ERG Fusion Status in Prostate Cancer Using Whole Slide Images.
Publication TypeJournal Article
Year of Publication2024
AuthorsOmar M, Xu Z, Rand SB, Alexanderani MK, Salles DC, Valencia I, Schaeffer EM, Robinson BD, Lotan TL, Loda M, Marchionni L
JournalMol Cancer Res
Volume22
Issue4
Pagination347-359
Date Published2024 Apr 02
ISSN1557-3125
KeywordsDeep Learning, Humans, Male, Oncogene Proteins, Fusion, Prostatectomy, Prostatic Neoplasms, Serine Endopeptidases, Transcriptional Regulator ERG
Abstract

Our study illuminates the potential of deep learning in effectively inferring key prostate cancer genetic alterations from the tissue morphology depicted in routinely available histology slides, offering a cost-effective method that could revolutionize diagnostic strategies in oncology.

DOI10.1158/1541-7786.MCR-23-0639
Alternate JournalMol Cancer Res
PubMed ID38284821
PubMed Central IDPMC10985477
Grant ListR01 CA200859 / CA / NCI NIH HHS / United States
T32 CA260293 / CA / NCI NIH HHS / United States
U54 CA273956 / CA / NCI NIH HHS / United States
Related Faculty: 
Brian Robinson, M.D. Massimo Loda, M.D. Mohamed Omar, MB, BCh Luigi Marchionni, M.D., Ph.D.

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